Protein Info for H281DRAFT_00968 in Paraburkholderia bryophila 376MFSha3.1

Annotation: MFS transporter, NNP family, nitrate/nitrite transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 455 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 52 to 69 (18 residues), see Phobius details amino acids 81 to 99 (19 residues), see Phobius details amino acids 105 to 128 (24 residues), see Phobius details amino acids 139 to 160 (22 residues), see Phobius details amino acids 168 to 189 (22 residues), see Phobius details amino acids 201 to 225 (25 residues), see Phobius details amino acids 232 to 249 (18 residues), see Phobius details amino acids 261 to 285 (25 residues), see Phobius details amino acids 297 to 315 (19 residues), see Phobius details amino acids 326 to 346 (21 residues), see Phobius details amino acids 352 to 371 (20 residues), see Phobius details amino acids 383 to 403 (21 residues), see Phobius details amino acids 414 to 435 (22 residues), see Phobius details PF07690: MFS_1" amino acids 19 to 400 (382 residues), 103.2 bits, see alignment E=7.4e-34

Best Hits

KEGG orthology group: K02575, MFS transporter, NNP family, nitrate/nitrite transporter (inferred from 97% identity to bgf:BC1003_1696)

Predicted SEED Role

"Nitrate/nitrite transporter" in subsystem Nitrate and nitrite ammonification

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MB17 at UniProt or InterPro

Protein Sequence (455 amino acids)

>H281DRAFT_00968 MFS transporter, NNP family, nitrate/nitrite transporter (Paraburkholderia bryophila 376MFSha3.1)
MKNVMSSLKSGDWRALVACFLYFDTGFTVWVLYGPLAPFISKSIAMTPAQQGLLVAVPVL
SAAILRVTLGNLYQSAHGKRIALLGVLLSAVPTIVLPLLPSVPSYTLLLVLGVFLGVGGA
SFAVALPMAGSNYPPKVQGLVLGLAAAGNIGAVLDGFLFPQLATHYGWQTATGGALPLLA
IAGITLYFWANDSGVKTGSVLRAFGSFVVTLVGLIVLVLLVEAGIFGSGKTGVLLLPVIG
ALLAIAVLPKRYRAVLAERDTWVIMLVYSITFGGFVGMSSYVSLLLTNLYQLSKIDAGLF
MALLAATGALVRPLGGLIADKVSGVRALTVLLAIISVCDFVFAAVMPTLAGGIALLLCLY
LAFGLGNGATFQLVPHRWAGRTGLMSGIVGAAGGIGGFYLPVVMGMAKESTGSYQMGFAT
FGALAACAFVAIVALRRPWMAWSMQSGVMHAHATE