Protein Info for H281DRAFT_00953 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyltransferase involved in cell wall bisynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 388 PF13579: Glyco_trans_4_4" amino acids 21 to 177 (157 residues), 51.9 bits, see alignment E=2.9e-17 PF13439: Glyco_transf_4" amino acids 21 to 184 (164 residues), 76.6 bits, see alignment E=5.9e-25 PF20706: GT4-conflict" amino acids 158 to 320 (163 residues), 40.6 bits, see alignment E=4.1e-14 PF00534: Glycos_transf_1" amino acids 195 to 363 (169 residues), 118.1 bits, see alignment E=7.8e-38 PF13692: Glyco_trans_1_4" amino acids 204 to 343 (140 residues), 90.9 bits, see alignment E=2.3e-29

Best Hits

KEGG orthology group: None (inferred from 96% identity to bgf:BC1003_1678)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MCE9 at UniProt or InterPro

Protein Sequence (388 amino acids)

>H281DRAFT_00953 Glycosyltransferase involved in cell wall bisynthesis (Paraburkholderia bryophila 376MFSha3.1)
MTTSSIKSLQIGMHWFPERAGGLDRMYYSLVGALPGAGVAVRGVVAGSPKVAADTGGAIN
GFGSAGQSLPLRLMAARRALRQEISTSRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPW
ADESHVEGADSLGQRAKRYLEQSVYTRSSRLIVLSEAFGKILTSRYRISPERVRVVPGCV
DVEQFNLPITPAEARLKLQLPQDRPIVLAVRRLVRRMGLEDLIDAIRLLKPSHPDVLLLI
AGKGRLADELQARIDEAGLQDNVKLLGFVPDQHLAALYRAANISVVPTVALEGFGLITVE
SLASGTPVLVTPVGGLPEAVAGLSPDLVLPETGAKAIAAGLAGALSGSLKLPDADACRRY
ARENFDNSVIAKRVASVYSEAIASGGVH