Protein Info for H281DRAFT_00914 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Uncharacterized conserved protein YdiU, UPF0061 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 518 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF02696: SelO" amino acids 22 to 487 (466 residues), 444.8 bits, see alignment E=1.9e-137

Best Hits

Swiss-Prot: 91% identical to SELO_PARPJ: Protein adenylyltransferase SelO (selO) from Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)

KEGG orthology group: None (inferred from 92% identity to bug:BC1001_1689)

Predicted SEED Role

"Selenoprotein O and cysteine-containing homologs"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MB55 at UniProt or InterPro

Protein Sequence (518 amino acids)

>H281DRAFT_00914 Uncharacterized conserved protein YdiU, UPF0061 family (Paraburkholderia bryophila 376MFSha3.1)
MSFSPSIAGLSGPLAALSELLTNPTESAFARLGSTFLTRLPATPLSAPYLVGFSADTATL
LGLEPGLEKDPAFAEMFSGNSTREWPAEALPYASVYSGHQFGVWAGQLGDGRALGLGEVE
HAGQRFELQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALCVIGSDQP
VRREEIETAAVVTRVAPSFVRFGHFEHFYSNDRTDALRALADHVIERFYPHCREADDPYL
ALLNEAVLSTADLMVEWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDAGYICNHSD
SQGRYAYRMQPQIAYWNLFCLAQGLLPLLGERYEQSARNDKAIEDAQRVLGGFKERFGPA
LERRMASKLGLETVHDGDAQLVNRLFDVMHANRADFTLTFRNLARMSKHDASGDAPVRDL
FFDRAAFDAWANEYRARLSHETRDDAARAIAMNRVNPKFILRNHLAETAIRHAKEKDFSE
LERLAAVLRRPFDEQPEHEAYAGLPPDWASSLEVSCSS