Protein Info for H281DRAFT_00871 in Paraburkholderia bryophila 376MFSha3.1

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 849 transmembrane" amino acids 14 to 36 (23 residues), see Phobius details PF05170: AsmA" amino acids 10 to 682 (673 residues), 418.3 bits, see alignment E=6.9e-129 PF13502: AsmA_2" amino acids 540 to 711 (172 residues), 44 bits, see alignment E=2e-15

Best Hits

KEGG orthology group: K07290, hypothetical protein (inferred from 88% identity to bgf:BC1003_1576)

Predicted SEED Role

"exported protein, conserved"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MAT6 at UniProt or InterPro

Protein Sequence (849 amino acids)

>H281DRAFT_00871 hypothetical protein (Paraburkholderia bryophila 376MFSha3.1)
MARSSTMGRRIGKIVAWIVAIIVILVVALTVFILTFDWNRARPYVNDKVTQAIGRQFTIN
GDLKVGFRHPAGEIGWKSWVPWPRFSAANITIANPDWAKRPQFATLDEIDFQVKVLPLIA
HNIVIPAINLVNPSVDLERMNDGRNNWTFQLPSSKTPSQWKLQLHDIVFAKGNIALSDEQ
KKVDVQMVVDTLGQPIPIGEAMKQQEEASRKASAEAVGKEGAKKLSAQADAQAASAASAA
SAAAASGASATDIHASGTTAATGAAGGLTAGGSKGASGAASTAVAGAAAGSGASGAQAPA
ASSASGASADSTNAARGAQREVPPYAIGWTLKGTYNKTPVSGSGKVGGVLALQDANRPFP
VQADVKAGDLHVGLVGTITDPAHLSAVDMRLWVQGSSMAKLYSLTGVTLPDTPPYATEGR
LVGQFKNTGNVFKYENFTGRVGGSDLNGSLTYTARRPRPLLQGELVSHLLQFSDLAPVIG
ADSNASKAKRGDAARQPSDKVLPVEEFRTDRWKAIDADVKFTGRRIVKNADLPITDLYTH
VVMTDGVLSLEPLKFGVAGGTLASNIHLDGSSAPLKGRFATSARHLKLKQLFPNFKTMQN
ALGEINGDAALTATGNSPAALAATSNGEVKALVTEGTVSRLLMEAAGLNVANVVYEKLFG
NRDVKINCAAADFVATNGVLDSRVFALDTDDAVIDIDGNVNLRDETMDLGVHPHTKGFRV
FSLRSPLYAKGTFKDPHVGVNVGALALRGGAAVGLGLINPFAALLPLLAPSNNKPLPCTQ
LLSQVRQAPTAPPPGTKQKPKPAISLEGVPVNKRSSSAASDASAASAPAPTGRKPATVSP
ASAAEYKGS