Protein Info for H281DRAFT_00723 in Paraburkholderia bryophila 376MFSha3.1

Annotation: beta-mannosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: K01192, beta-mannosidase [EC: 3.2.1.25] (inferred from 80% identity to bgf:BC1003_1431)

Predicted SEED Role

"Beta-mannosidase (EC 3.2.1.25)" in subsystem Mannose Metabolism (EC 3.2.1.25)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (861 amino acids)

>H281DRAFT_00723 beta-mannosidase (Paraburkholderia bryophila 376MFSha3.1)
VDALTTDPVPESDHTGGLTAVAPDDIRPQRLDTGWQCISTPAGACESPGDLPDHGWLAAQ
VPGTVASARRAAGLFDVAHPEPLAFDDHWYRVTLNGTGKRRLRLHGLATIAEVWLDGIRR
LDSDSMFVEHELDVELNGSATLDICFRSLAPALAAKRSRARWRPRLVSPPTLRNVRTTLL
GHMPGWCPSVHAVGPWRPVEMLSDARNGIDRFEVASRIDGDDGIVSLTLRFVHPHDRAAC
RASLGCGGHVSSLQWRDAFTLTGSVRVPCVERWSPHTHGAPTLYPLLLHLDDSGVIALPL
GSIGFREIAVERGADGTGFALHINGVPVFCRGACWTSADLVTLAGSEAQLRQAFELARDA
GMNMLRVGGTMVYESDLFYTLADEYGVLVWQDFALANFDYPNDAAFRASIECEASQFLAR
TRRFASLAVLCGGSEADQQAAMFGLPPSMRVQPVFDELLPAIAARERPDVPYVSNSPSTG
VWPFCTSEGITHYYGVGAYQRPLDDARRSQVRFAAECLAFANVPDDATLNEALGTIHPHD
PRWKAAVPRDPGAGWDFDDVRDHYLQTLYGIEPARLRYEDPQRYLDASRAVVADLMAEVF
TEWRQHGSDCGGGLVWQLQDLRPAAGWGLIDATGRPKSALHGLAHTLQPIQVLLTDEGLN
GLDIHLINERAQTLSAQLELVCLRDGRVKVAQASRAVQLAPRSTARISAAACLDQFFDLT
HAYRFGPRAHDVTIATLRDAASGKILSEAFHLPERRIGDRHELGLTVEVERAGDGWQLVI
EAQRFARFVHINDAKYRAAHDWFHLAPNRPRIVPLIPLAPNASQSAVVACASNVAFKADA
TNAAPAGEVLALNAASPTFYG