Protein Info for H281DRAFT_00715 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Glycosyltransferase involved in cell wall bisynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 442 PF13439: Glyco_transf_4" amino acids 60 to 227 (168 residues), 58.5 bits, see alignment E=1.7e-19 PF00534: Glycos_transf_1" amino acids 241 to 404 (164 residues), 129.2 bits, see alignment E=2.4e-41 PF13692: Glyco_trans_1_4" amino acids 256 to 392 (137 residues), 105.2 bits, see alignment E=7.1e-34 PF13524: Glyco_trans_1_2" amino acids 338 to 423 (86 residues), 40.7 bits, see alignment E=4.5e-14

Best Hits

KEGG orthology group: None (inferred from 84% identity to bug:BC1001_1930)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (442 amino acids)

>H281DRAFT_00715 Glycosyltransferase involved in cell wall bisynthesis (Paraburkholderia bryophila 376MFSha3.1)
MRPPLDASPIATPLPLVSPVFIDPVAAPAAPVGSGMSAPTVRQTSALPRVLFVDQSGQLG
GAEFALLQLAEHCRSHSEVVLLADGPFRMRLEALGARVQVMNDAKVSGIARQASALNCLR
VLPGIVRQVRALAARARAFDVLFVNTQKALVLGALGKVLYRKPVVWYQHDILTREHFGRV
QLSVIKWAVRLAVDHVIVNSQASARSLAALTGLAADSVPVVYNGIDASAFDRVDGTDIGS
LRQRLGLPENAWLAGLFGRLAPWKGQHIALEALARLPDAHLVLVGAPLFGEDAYAQRLRD
QAAALGIAERVHFAGFQDDVPTWMKAMNVILHTSTEPEPFGRVIVEGMAAGRPVIAAAAG
GVTEIVRHGRNGWLVKPGDAAALAEAIVALRADPALAQRLAQQALTDAQAEFSVERYLQR
MMDALTAAMRRPGDRTNTQASR