Protein Info for H281DRAFT_00481 in Paraburkholderia bryophila 376MFSha3.1

Annotation: molecular chaperone HscB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 179 TIGR00714: Fe-S protein assembly co-chaperone HscB" amino acids 22 to 177 (156 residues), 102.7 bits, see alignment E=1.1e-33 PF07743: HSCB_C" amino acids 96 to 170 (75 residues), 66.3 bits, see alignment E=1.3e-22

Best Hits

Swiss-Prot: 95% identical to HSCB_PARPJ: Co-chaperone protein HscB homolog (hscB) from Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)

KEGG orthology group: K04082, molecular chaperone HscB (inferred from 95% identity to bpy:Bphyt_2576)

Predicted SEED Role

"Chaperone protein HscB" in subsystem Protein chaperones

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5M9W3 at UniProt or InterPro

Protein Sequence (179 amino acids)

>H281DRAFT_00481 molecular chaperone HscB (Paraburkholderia bryophila 376MFSha3.1)
MVSLNVSLNDSHFDLFGLPAQFALDPAALDHAYRTVQAQVHPDRFAAAGDAQKRIAMQWA
TRTNEAYQTLRDPLKRATYLLHLRGIDVGAHDNTAMEPAFLMQQMEWREGIEDAAAAKNV
DALDALLTELRDEERIRFEKLGALLDSGANQAAGEAVRQLMFIERVAAEIGTQIERLED