Protein Info for H281DRAFT_00267 in Paraburkholderia bryophila 376MFSha3.1

Annotation: chromate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 60 to 78 (19 residues), see Phobius details amino acids 90 to 112 (23 residues), see Phobius details amino acids 124 to 142 (19 residues), see Phobius details amino acids 153 to 169 (17 residues), see Phobius details amino acids 172 to 191 (20 residues), see Phobius details amino acids 203 to 223 (21 residues), see Phobius details amino acids 235 to 257 (23 residues), see Phobius details amino acids 269 to 291 (23 residues), see Phobius details amino acids 297 to 317 (21 residues), see Phobius details amino acids 337 to 354 (18 residues), see Phobius details amino acids 360 to 377 (18 residues), see Phobius details amino acids 382 to 401 (20 residues), see Phobius details PF02417: Chromate_transp" amino acids 19 to 183 (165 residues), 80.3 bits, see alignment E=8.6e-27 amino acids 236 to 390 (155 residues), 88.1 bits, see alignment E=3.5e-29

Best Hits

KEGG orthology group: K07240, chromate transporter (inferred from 93% identity to bgf:BC1003_0992)

Predicted SEED Role

"Chromate transport protein ChrA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MGU7 at UniProt or InterPro

Protein Sequence (402 amino acids)

>H281DRAFT_00267 chromate transporter (Paraburkholderia bryophila 376MFSha3.1)
MQTITSHDAARRGEREPLWTLFRVVFGLSALSWGGLALMAQLENHYVEREGRLSRVAFSD
LIALAWMVPGPVGCNAAVQLGHALRGRAGAWVAGIASVLPFFMLMTLFAIFYRTPIVRAA
ASQTLLNHFSVVLATLIGITWYKQTRALVRGKLEWTAAVVGCIALFYAHSPAAYVLMLSA
AFGAGWVVSPVRDTRFAVSFARVDWQILTMLCVFVLLFALPLPHRYDLALLWPRLAGAGM
TLFGGGFSALPVLKTLFVTPTIGISDNDFTLAFSLSPLSPGPLLNVVPFFGYLVDGWAGA
LIATLALFVPSGCLVVLAQQHLHQLKMNQQFEHGMRILRAVTTAFLAVAVLRIAGRVPLQ
PVYLITALFSAMCFAKLKVPVYVVYGTVAVVCGLWLAYGALL