Protein Info for H281DRAFT_00110 in Paraburkholderia bryophila 376MFSha3.1

Annotation: hydrophobic/amphiphilic exporter-1, HAE1 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1064 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 351 to 369 (19 residues), see Phobius details amino acids 381 to 413 (33 residues), see Phobius details amino acids 444 to 466 (23 residues), see Phobius details amino acids 473 to 494 (22 residues), see Phobius details amino acids 553 to 574 (22 residues), see Phobius details amino acids 880 to 898 (19 residues), see Phobius details amino acids 909 to 929 (21 residues), see Phobius details amino acids 935 to 956 (22 residues), see Phobius details amino acids 993 to 1013 (21 residues), see Phobius details amino acids 1025 to 1048 (24 residues), see Phobius details PF00873: ACR_tran" amino acids 4 to 1048 (1045 residues), 910.3 bits, see alignment E=7.5e-278

Best Hits

Swiss-Prot: 49% identical to NOLG_RHIME: Nodulation protein NolG (nolG) from Rhizobium meliloti (strain 1021)

Predicted SEED Role

"Acriflavin resistance protein" in subsystem Multidrug Resistance Efflux Pumps

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MAV5 at UniProt or InterPro

Protein Sequence (1064 amino acids)

>H281DRAFT_00110 hydrophobic/amphiphilic exporter-1, HAE1 family (Paraburkholderia bryophila 376MFSha3.1)
MWFTRISIGNPVLATMMMMAFLVIGLFSYQRLKVDQFPDITFPIVVVQTAYPGASPESVE
SDVTRKIEEAINTISGIDQITSRSYDAQSVVIVQFDLAVDAVQAAQDVRDKIALIRPDLR
DGVKEPRVLRYDPADMPIVTVAVSNAPGASLSTRDLTTVADQIVRKRLETVRGVGSVSLV
GGVKRQVQIDVNPQKLQALSVGVDQVIRAVQNENQEIPAGPLTSNSVEQTVQVKGRFETP
ADFKRIIVARRGAQSAIPTASSTSQPVTLDQVADVIDGQQEADSMALLNGRRALFLSIIK
AQGENTVDVAHGVRAEVARLQPQLPPGVKLDITDDSSINIEESVNEVKRTLFEGALLTVF
IVFLFLGSWRSTVITGLTLPIALIGTFAVMYACGFTINVITLMALSLCVGLLIDDAIVVR
ENIVRHVQLGADHRTAALDGTKEIALAVLATTFSIVAVFLPVGFMGGIIGRFFHQFGITV
AAAVLISMFVSFTLDPMLSSIWPDPDLHDADTGRKGYRYGRFVERSLHLFDKQIAQLSAL
YQRLLGWSLEHRAITLVVAAATFFGSLFLVPFVGTEFVPNADFSITKIGLNTPVGTSLEA
TSKKVQQVEAILATYPEVRYTYATVNSGNTQGKNNALITVRLKDRRDRTRGVAELNQMFR
ARLASVAGVTVTEIGMPDGAGSTKAIQLSLQGDNMDELRRLSEAAQARMRKIRGLVDLDS
SLKADKPIVAINVKRELASDLGVGVADIGTALRPLLSGDAISTWRAPDDQDYDVSVRLPR
EQRESIDDLSRLMIATNRTDSNGAPVLVPLRQIADIVKTTGPDVLNRRDLQREVMLTTNV
NGRSSGEVASDIAKTLDAMHLPAGYRYRFEGSTKNMNESLVFAVEALALAVIFIYMILAS
QFASFAQPLAIMASLPLTLIGVLVALLLFGSTLNMFSIIGFVMLMGLVTKNAILLVDFAN
QARRGTLLDASGKGRVMERREALLEAARVRLRPILMTTLAMIFGMLPLAAALGEGGEQRG
PLGQTVIGGVITSSILTLVVVPVVYTVLEDWADWLRRKLRRRAG