Protein Info for Ga0059261_3584 in Sphingomonas koreensis DSMZ 15582

Annotation: 2-octaprenylphenol hydroxylase (EC 1.14.13.-)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 510 transmembrane" amino acids 488 to 509 (22 residues), see Phobius details TIGR01982: 2-polyprenylphenol 6-hydroxylase" amino acids 8 to 439 (432 residues), 537.3 bits, see alignment E=1.1e-165 PF03109: ABC1" amino acids 91 to 337 (247 residues), 244.5 bits, see alignment E=4.7e-77

Best Hits

Swiss-Prot: 36% identical to UBIB_DELAS: Probable protein kinase UbiB (ubiB) from Delftia acidovorans (strain DSM 14801 / SPH-1)

KEGG orthology group: K03688, ubiquinone biosynthesis protein (inferred from 73% identity to swi:Swit_4883)

Predicted SEED Role

"Ubiquinone biosynthesis monooxygenase UbiB" in subsystem Ubiquinone Biosynthesis

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1L6JE47 at UniProt or InterPro

Protein Sequence (510 amino acids)

>Ga0059261_3584 2-octaprenylphenol hydroxylase (EC 1.14.13.-) (Sphingomonas koreensis DSMZ 15582)
LTAPAVHLWRLLKWGRTLARHGALRGIERDRNTPRPVRRLARLARFGARVPATPQYADAL
QAIGPAAIKLGQTLATRADLIGEAAAHDLMRLQDALPPVPFPVIRAAIERSFDRPIEDLF
AEIEEVPIGAASIAQVHRATTTDGRKVAVKVLRPGIEAEFAKAIDTYEWAAAQLEAQGGE
VARLRPRLVIETFKRWTARELDLRREAASASELSESMEAEPDFTVPAIDWQRTTGKVLTL
EWIDGIKLSNRDAIIAAGYDTRKLADTLVRAFLRQAISEGFFHADMHQGNLFALPGNHIA
AIDFGIMGRIDRRARVWLAEILYGLITGNYRRVAEIHFEAGYVPAHHNVAEFATALRAVG
EPMRGLPVKDMSVGMMLDSLFNITRDFDMQTQPHLLLLQKTMVMVEGVATRLHPDINLWD
SAAPFIREWIRTELGPEAFIADRLSEDLKTLARLPKLIRNIERHFPDPGGAPPAPPLREI
EVVRVGGGWRYAVVALLAAGAGVAATLLLR