Protein Info for Ga0059261_2650 in Sphingomonas koreensis DSMZ 15582

Annotation: glucose/galactose transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 transmembrane" amino acids 22 to 43 (22 residues), see Phobius details amino acids 60 to 80 (21 residues), see Phobius details amino acids 89 to 109 (21 residues), see Phobius details amino acids 115 to 139 (25 residues), see Phobius details amino acids 152 to 173 (22 residues), see Phobius details amino acids 201 to 227 (27 residues), see Phobius details amino acids 248 to 270 (23 residues), see Phobius details amino acids 286 to 304 (19 residues), see Phobius details amino acids 315 to 334 (20 residues), see Phobius details amino acids 340 to 362 (23 residues), see Phobius details amino acids 374 to 392 (19 residues), see Phobius details amino acids 398 to 418 (21 residues), see Phobius details PF07690: MFS_1" amino acids 28 to 382 (355 residues), 79.4 bits, see alignment E=1.3e-26 TIGR01272: glucose/galactose transporter WARNING" amino acids 106 to 415 (310 residues), 286.2 bits, see alignment E=1.8e-89

Best Hits

KEGG orthology group: K02429, MFS transporter, FHS family, L-fucose permease (inferred from 86% identity to sjp:SJA_C1-09620)

Predicted SEED Role

"Predicted mannose transporter, GGP family" in subsystem Mannose Metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WEJ2 at UniProt or InterPro

Protein Sequence (425 amino acids)

>Ga0059261_2650 glucose/galactose transporter (Sphingomonas koreensis DSMZ 15582)
MAFQQPAGAVPAAPAPESYRRALALLASLFFMWGFITVINNTLLPHLRSVFDLDYTRTTL
IESVWFIAYFVASIPSARLIERIGYQRSLVAGLLVMAAGSAGMMLAASIPSYGVTLAMLF
VIASGITLLQVAANPYVAVVGRPETASSRLNLVQAMNSAGTMLAPAFGAWLILGRSKGGT
SEAGTVLTQAERFADAQSVILPYGLVAVALVMLALVIACFPLPAMGAATRRLAKEERRNH
SLWKHRNLVFGVPAIFIYLIAEIGVANLFVNFVSQPDIANLTHEQAGHYLTFLWGGMMAG
RFAGSALMQRFDAAHVLAVFAIGAFAVMLVATFATGPTAMWALILVGFFHSIMFPTIFTL
GIRGLGPLTEEGSGLLIMAIAGGALVIVQGWLADQWGLQLSFLLTAACEVYVLFYALWGS
RTAPA