Protein Info for Ga0059261_2300 in Sphingomonas koreensis DSMZ 15582

Annotation: Monoamine oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 519 PF13450: NAD_binding_8" amino acids 67 to 132 (66 residues), 49.5 bits, see alignment E=4.2e-17 PF01593: Amino_oxidase" amino acids 72 to 511 (440 residues), 148.4 bits, see alignment E=4.2e-47

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WDJ8 at UniProt or InterPro

Protein Sequence (519 amino acids)

>Ga0059261_2300 Monoamine oxidase (Sphingomonas koreensis DSMZ 15582)
MRGSETLWRALALARRQDLAARGKAAPRAGHGGIGRRALLQGMAASGVAAGLPVQAMALP
ASGRVAIVGGGIAGLSALHHLAKAGIDARLYEARNRLGGRMYTQLTSEGQVFEAGGQLVN
SDHADMHALAKEFAVPLVDRKSGPHRSVILADGAVASQAELARLLAPLAARIARDSEAVD
ASPRAAAAIDRLSVAQYLDRHAALIRDRRIRALIEASIRTEYGSEPGDASALQLIFNLPT
VKGEHVEVLAGSDERYVIAGGSGRLVNAIADAHRDRIETGRRLRAIRETGSGLRLEFVDG
THVMADTVIVAAPAPILRQIDFAVPLSARWREFVAEADLGRNEKLQATASATPWQAILGT
GGELWDTAPPYALGWEGTIRGGEDGRPVWTWFLGGEQVDAAAAVSPHALADAFARLSEIG
IPGIAQAVAGGMVRRTNWCNDALTLGAYTNSAPGQLTRFGPLFWVESATPAERQQAVAGR
VLFAGEHVSDAWVGFMNGGAQTGRLAAQAVIAARSRSAR