Protein Info for Ga0059261_2195 in Sphingomonas koreensis DSMZ 15582

Annotation: Nucleotide-binding protein implicated in inhibition of septum formation

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 195 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF02545: Maf" amino acids 2 to 188 (187 residues), 150 bits, see alignment E=3.3e-48

Best Hits

Swiss-Prot: 53% identical to NTPP_SPHAL: Nucleoside triphosphate pyrophosphatase (Sala_2841) from Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)

KEGG orthology group: K06287, septum formation protein (inferred from 66% identity to sjp:SJA_C1-00020)

Predicted SEED Role

"Septum formation protein Maf" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WDA6 at UniProt or InterPro

Protein Sequence (195 amino acids)

>Ga0059261_2195 Nucleotide-binding protein implicated in inhibition of septum formation (Sphingomonas koreensis DSMZ 15582)
MIVLASTSASRRAMLTAAGVPHEALAAHVDEDAAKAGLAGVAPRDLADALAELKALKVSQ
RVPGTLVLGCDSVVAIEDGILLDKPVDRADAQRHLRLLSGKRHDLYSAAVIAENGRPVWR
HVDRARLTVRPLSDAFIADYLDAEWPAIAGCVGCYRVEGRGVQLFSRMEGSQYTILGMPL
LNILDYLRTRGVLTS