Protein Info for Ga0059261_2096 in Sphingomonas koreensis DSMZ 15582
Annotation: Flagellar basal-body P-ring protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 70% identical to FLGI_SPHWW: Flagellar P-ring protein (flgI) from Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)
KEGG orthology group: K02394, flagellar P-ring protein precursor FlgI (inferred from 70% identity to swi:Swit_1264)Predicted SEED Role
"Flagellar P-ring protein FlgI" in subsystem Flagellum
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1L6J7R4 at UniProt or InterPro
Protein Sequence (364 amino acids)
>Ga0059261_2096 Flagellar basal-body P-ring protein (Sphingomonas koreensis DSMZ 15582) MTRFLIALLTAFLFAQPVAAERIKDLGAFQGIRSNQLTGYGIVVGLPGTGDDNLEYTVQS MKGVTARFGLALPPGVNPALKNAAVVMITAELPPFAKPGQKLDITVSSMGKAKSLRGGTL VLTPLIGADGQIYAMAQGNLAVGGLGAEGADGSKIVVNTPSSGRIPEGATVERAVETGFA DTPMLTYNLARSDFTTAQRVADAINGRFGFGTARAIDGVSVAVMAKPGADVRAQMMSEIE NLAVDAAEAPAKVIVNARTGTVVINSAVRVSPAAVTHGKLTVRIDEAQRVSQPAPFSQGE TALEQRSTVGVEEERRPMFLLDPGPKLADVVKAVNAIGASPADLVAILEALKQAGALKAE LIVL