Protein Info for Ga0059261_1886 in Sphingomonas koreensis DSMZ 15582

Annotation: phenazine biosynthesis protein PhzF family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 263 TIGR00654: phenazine biosynthesis protein, PhzF family" amino acids 1 to 232 (232 residues), 130.7 bits, see alignment E=3.6e-42 PF02567: PhzC-PhzF" amino acids 8 to 110 (103 residues), 111.3 bits, see alignment E=3.1e-36 amino acids 152 to 259 (108 residues), 66.2 bits, see alignment E=1.8e-22

Best Hits

KEGG orthology group: K06998, (no description) (inferred from 60% identity to sal:Sala_0653)

Predicted SEED Role

"Phenazine biosynthesis protein PhzF" in subsystem Phenazine biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WCD8 at UniProt or InterPro

Protein Sequence (263 amino acids)

>Ga0059261_1886 phenazine biosynthesis protein PhzF family (Sphingomonas koreensis DSMZ 15582)
MQLPFAQIDAFADRPFTGNQAGVMPLDTWLDDDVLQAIAEENNLAETAFIVRDASGEADW
ELRWFTPTVEIALCGHATLASGHYLLTRDPALEQVRFRTRKAGILTVTREGEGYALALPA
YPAGPADIPGLLEALGVSHGTVLHHPKGYDLTVLESAETVRALAPDFRALAALGDTLNIV
TAPGDGTDIISRVFAPAAGIDEDPVTGSAHSVLIPYWAERLGRNRFTAFQASKRGGYLDC
EAAGDDAILRGTCVTVIEGVFTL