Protein Info for Ga0059261_1702 in Sphingomonas koreensis DSMZ 15582

Annotation: N-acyl-D-aspartate/D-glutamate deacylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 539 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF01979: Amidohydro_1" amino acids 408 to 516 (109 residues), 27.1 bits, see alignment E=2.5e-10 PF07969: Amidohydro_3" amino acids 429 to 519 (91 residues), 58.1 bits, see alignment E=1.2e-19

Best Hits

KEGG orthology group: None (inferred from 56% identity to gau:GAU_2024)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WBZ2 at UniProt or InterPro

Protein Sequence (539 amino acids)

>Ga0059261_1702 N-acyl-D-aspartate/D-glutamate deacylase (Sphingomonas koreensis DSMZ 15582)
MMKRKILFGALSLLLVANAPAPEYDIVIRGGRVLDGAGSPWVRADVAVKDGRVVRIGQVS
GRGAKEINARDRYVSPGFIDMMDQSGSVLLKNGAAENKLRMGVTTVIAGEGGTPVPAAEI
PAYFGKLEQQGISINFGTYYSATQARIKVMGDGAGSPTAAQLEEMGREVKLAMQNGAFGI
TSALIYPPSSFQTTSDLVTLAKVAAQCDGFYATHMRDESEGLVKAVEEAIEIGEKGGVKV
EIFHLKGAYAPGWGKLMPQALAAINAARARGVDVAADLYPYTAGGTGLEIIAPSWVWADG
VQKGIERLRDPKLRERMKKEVAAGSMPGWSNLVHASGGFQNVRLANSFSDKYRPYHGKSL
AEIGATLKRDPADVAWDILLEGLPNRSVALYFMMNEQDIEAALKQPWVSIGSDAAASEKF
GEMDDLGLPHPRAYGTFPRIIAEYVKRRPVLTLEDAVRKMTGWPAQRMGLTDRGLIRDGM
RADIVVFDLDTLDDVANWDKPTASPTGIETVIVNGVVTFADGKHSGAKAGKVLRHGCGV