Protein Info for Ga0059261_0353 in Sphingomonas koreensis DSMZ 15582

Annotation: 6-phosphogluconolactonase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 235 TIGR01198: 6-phosphogluconolactonase" amino acids 10 to 226 (217 residues), 157.9 bits, see alignment E=1.6e-50 PF01182: Glucosamine_iso" amino acids 12 to 224 (213 residues), 162.8 bits, see alignment E=5.9e-52

Best Hits

KEGG orthology group: K01057, 6-phosphogluconolactonase [EC: 3.1.1.31] (inferred from 66% identity to swi:Swit_2888)

Predicted SEED Role

"6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type" in subsystem Entner-Doudoroff Pathway or Pentose phosphate pathway (EC 3.1.1.31)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.31

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1L6JCG2 at UniProt or InterPro

Protein Sequence (235 amino acids)

>Ga0059261_0353 6-phosphogluconolactonase (Sphingomonas koreensis DSMZ 15582)
MAEEIEWWEYEEAEEWVDALAGDIGFIIESAIDARGGAVIALAGGKTPAPVYEKLAAAKI
DWKRVTIVPTDDRIVPLGDALSNVTGLGKTFIPKGARVIPLVSEKADDYKAAGRAADARL
ADFHWPLDLVLLGMGADGHTASIFPGPDFDEALNGPKERRALGVMPDPLPPEAPVARVTL
SGAAIANAKSLMVAITGAEKRKVLETAIAQGASSAYPIGRVLAETELPVDVHWLE