Protein Info for Ga0059261_0321 in Sphingomonas koreensis DSMZ 15582

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 767 transmembrane" amino acids 53 to 75 (23 residues), see Phobius details amino acids 86 to 108 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

"FIG00636565: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8W839 at UniProt or InterPro

Protein Sequence (767 amino acids)

>Ga0059261_0321 hypothetical protein (Sphingomonas koreensis DSMZ 15582)
MNGGTNAAGFAANEEDGLTLVEEPIAQVSAAHPAYDPAEDLELEEVYRAPGEWLVPLIAA
GLTLAWFGVMGWLLQPAFAQPMPPVQLVQLIAALCVPPILIGILWLLARRSSRAEARRFG
NTARAMREEAASLERVIATLARKIEANRAALAAQTTALMAMGDGAAERLQAVSNGMAAEA
RSVDASAKILMESAATAEKSVAIVLASLPKAHEGMIGMAATLDAAGLKAGEHAAALDAQL
SALAERGREADTVAGGAAQRLAAHIAKMEATSETAGARLEGVADQMSGTVDAMLDRTAAA
VDEARKGIAAQGEAMLAMLAANQASLDAAGRESIEAVGTRVGEIEETISRIAEKLGEEQT
RIDILLASVTGGIAQADGAMAALHSAGMDRTQALAASISALDSSTAAMTETLKIGDETAR
RVIATAEDLLTALDSSAREIDETMPEALNRLEDRIGSTRTVIASAKPELLALVTAAESTH
DAIEAIADVVSRQRETLIKTQAALIETLDSGHEKTDQLEETVDRAIANARRFADDAAPQL
VDALLRIRETAAAAAEQARATLSGLVPEAERRLEEAGSAAMRRAVDAGVRQQLVELSLVS
ENAVATAGRASEHLTQQMMNIGEAAAAVERRIEEGRAEREEADRDNFARRVSLLVEALNS
AAIDITKAFAHEVSDSAWSAYLKGDRGVFTRRAVRLLDSGDAREIAGLYDSDPHFREQVN
RYIHDFEAMLRQVLALRDGSPLGVTLLSSDMGKLYVALAQAIERLRT