Protein Info for Psest_0912 in Pseudomonas stutzeri RCH2

Annotation: Tellurite resistance protein TerB.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 827 transmembrane" amino acids 12 to 28 (17 residues), see Phobius details amino acids 34 to 52 (19 residues), see Phobius details PF13208: TerB_N" amino acids 154 to 360 (207 residues), 209.1 bits, see alignment E=9.9e-66 PF05099: TerB" amino acids 566 to 670 (105 residues), 37.8 bits, see alignment E=3.2e-13 PF15615: TerB_C" amino acids 703 to 825 (123 residues), 120 bits, see alignment E=1.6e-38

Best Hits

KEGG orthology group: None (inferred from 97% identity to psa:PST_3463)

Predicted SEED Role

"FIG00961914: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GJL5 at UniProt or InterPro

Protein Sequence (827 amino acids)

>Psest_0912 Tellurite resistance protein TerB. (Pseudomonas stutzeri RCH2)
MAGKRKRSSKSGVSGAMVLCALVIGGLASVPKGVWVFLGGALIVGIGGWLVIKAFSKPSV
MSSATTMRPPQGGTRSSSSDLGISTGLTFSLDEVSPLNEPSAPAQVSASPRQVSAKRDDS
GFFTVTLEATERSSHRIPSAPANLNSANVRWLSAGESIEVAGENIPIGLIYVGEDKNRRN
GPSEPSLINPKLKVARGIVDISERLTSYWPSYDSISPEARRAYLQWLSSGRKAPHANIGY
VFLFFYGLERRVFVDAKTDQAAAGDIPIIIAEVERLLSIYGKNNSFNNYASRFVDFLRQG
QILARRYQKAPPAPLPYGYEMPVELRIGLGQLAADKQPMPADWALAWVLSDHNVGKRTPV
TRCKEAFAQLFCMRYEERYGAGMVLPQNKTRLRLQYNTASAGLPPQELDGLSGIPDVTAT
SAARKKLQQLVDECTVQLEPYSRYLGRNPDTPDALEGLLQLPVNLWPPTARTALAELKQR
IGDGMVVMSFGELAGRLQCAGSLSREKVLTLARALESLHIGIEPDVLTGSRTPKSEDNVA
LFATQADDGDLRSSPAYSAASVTLDLACAVAAADGDTSPQEIMLLSQHIDSWSHLSGAHR
KRLKAHLRLQLNQPPTLQSLKKKLEPLAEPAKRVVAAFLAHLAQVDGEVSPAEVKLLERV
YKTLQLDPQSLYSDLHVASSGSSVGSSQTTPSIPGASPSKPVGGFALDQERIAQLQRETE
QVSALLAQVFVDDKPAEPDDVVVEETVEDTSSICGLDADHSAFLRVLVSRTEWSHDELEA
VASDMELMLDGALEQINDMAFEHFDMPVTEGEDPFEVNPDIMDKLPL