Protein Info for HP15_8 in Marinobacter adhaerens HP15

Annotation: secreted protein containing DUF1329

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 460 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF07044: DUF1329" amino acids 88 to 432 (345 residues), 392.6 bits, see alignment E=2.1e-121

Best Hits

KEGG orthology group: None (inferred from 64% identity to gag:Glaag_0396)

Predicted SEED Role

"FIG002188: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PHI4 at UniProt or InterPro

Protein Sequence (460 amino acids)

>HP15_8 secreted protein containing DUF1329 (Marinobacter adhaerens HP15)
MKLRKLLCNLAISLSVFGLASNVSAAVSPEAAQKLGNELTPFGAIKAGNDEGTIPPYEGG
LRTAPEGFEPGNGYWINPFKDEEPRLRIDASNYQEHEDKLSAGQIKLLSTYPDTYYIDVY
PTHRTAAYPQDVLDATVRNATTCETLKDGLALDPSCRGGLPFPIPQTGNEMMWNQQVRYN
DGKYGTTTAASNSWIVDSNGSVTKASEQRTFVERPFYQTDVEGRDPQMFYRVYSVTQEPA
RRAGELTGFMDFLDPTESPRRAWSYTPGQRRIKRAPEFAYDTPVASMGGLELFDELFMFS
GMQDRFDFKLVGRKEMYIPYNTYEFYFDCEQDNQFMKHHVNPECERWELHRVWVVEATLK
DQYRHVYSKRTYYLDEDTYGAGMYDAWDQSGQLYRSMMLGGVQFYDHDIPYIVKHAIYDF
NKGMYGIINDALNGGYRVLEEPRSERELSPQVIVNRESAR