Protein Info for PGA1_c06390 in Phaeobacter inhibens DSM 17395

Annotation: putative sulfate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 546 transmembrane" amino acids 35 to 56 (22 residues), see Phobius details amino acids 61 to 77 (17 residues), see Phobius details amino acids 83 to 100 (18 residues), see Phobius details amino acids 106 to 125 (20 residues), see Phobius details amino acids 136 to 154 (19 residues), see Phobius details amino acids 167 to 187 (21 residues), see Phobius details amino acids 194 to 215 (22 residues), see Phobius details amino acids 257 to 280 (24 residues), see Phobius details amino acids 331 to 352 (22 residues), see Phobius details amino acids 357 to 377 (21 residues), see Phobius details amino acids 389 to 420 (32 residues), see Phobius details PF00916: Sulfate_transp" amino acids 33 to 393 (361 residues), 169.7 bits, see alignment E=1.3e-53 PF01740: STAS" amino acids 434 to 519 (86 residues), 35.1 bits, see alignment E=1.4e-12

Best Hits

KEGG orthology group: None (inferred from 71% identity to jan:Jann_3208)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7DY55 at UniProt or InterPro

Protein Sequence (546 amino acids)

>PGA1_c06390 putative sulfate transporter (Phaeobacter inhibens DSM 17395)
MTRGIMATLAKQISPPNLSIMQDEGFTVSRVRTELLSGLTVALALVPEAVAFAFVAGVHP
LVGLYAAFMVGLITAVFGGRPGMISGATGALAVVMVALVAQHGVEYLFATVVLMGILQII
AGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKDPSNTEAWLAGPQLMMMLGLVG
LTMLIIWGTPKITAIIPAPLAGIGIVAALVIAFGINVPTVGDMASIKGGFPSFHNPFGTG
EGLYGTALAPFTLETLWIILPYAVILAAIGLIESLLTLNLVGEITGKRGGASQECIAQGA
SNVVTGFFGGMGGCAMIGQSMINVKSGGRTRIAGIAAALFLLAFIVVASPLIEQIPLAAL
VGVMFMVVIGTFAWNSFKVMTKVPLMDAFVIVLVTVVTVMTDLAIAVVVGVIVSALAYAW
NNARRIHAYTRESESDKGAKVYEIEGPLFFGSTDGFIELFDVAGDPDHVIVDFARSRVVD
QSALQAIEALAGKYEAEGKALVLRHLSRDCHQLLTKAGHLMVDSDDDPDYALAVDYSVKT
GILGGH