Protein Info for Psest_0623 in Pseudomonas stutzeri RCH2

Annotation: Arsenite efflux pump ACR3 and related permeases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 327 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 45 to 65 (21 residues), see Phobius details amino acids 76 to 98 (23 residues), see Phobius details amino acids 105 to 125 (21 residues), see Phobius details amino acids 134 to 154 (21 residues), see Phobius details amino acids 170 to 192 (23 residues), see Phobius details amino acids 205 to 230 (26 residues), see Phobius details amino acids 238 to 258 (21 residues), see Phobius details amino acids 270 to 290 (21 residues), see Phobius details amino acids 296 to 317 (22 residues), see Phobius details PF01758: SBF" amino acids 49 to 226 (178 residues), 59.8 bits, see alignment E=1.5e-20

Best Hits

KEGG orthology group: None (inferred from 66% identity to ppg:PputGB1_0702)

Predicted SEED Role

"Arsenical-resistance protein ACR3" in subsystem Arsenic resistance

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GEQ7 at UniProt or InterPro

Protein Sequence (327 amino acids)

>Psest_0623 Arsenite efflux pump ACR3 and related permeases (Pseudomonas stutzeri RCH2)
MRNKGRYQMSRDWLEEHQIAFYFAAVVAAAIAGLSSAQFTGLTAMAITPAIAVLMYAMFL
QIPFLELREAFANRRFVGALLLANFLLVPLMVWLVTWPLSSNKALLVGALLVLLTPCIDY
VVVFTHLGKGDSRLVLAATPLLLLLQLLLLPLYLRLILGPEAGTVIELWPFAEAFLLLIV
LPLVAAVLTEFGGRRSLLLRAWSAGWAWLPVPAMALVLIVVVGSQIAAVVYQLDILAPLL
PVYGAFLLLAPALGVLSSRLFGLEASAARAVAFSSGTRNSLVVLPLALALPESIRALAAA
AVITQTLVELIGELIYLRAIPAMVRNS