Protein Info for HP15_593 in Marinobacter adhaerens HP15

Annotation: protein belonging to uncharacterized protein family UPF0118

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 transmembrane" amino acids 7 to 25 (19 residues), see Phobius details amino acids 31 to 49 (19 residues), see Phobius details amino acids 61 to 84 (24 residues), see Phobius details amino acids 155 to 173 (19 residues), see Phobius details amino acids 212 to 230 (19 residues), see Phobius details amino acids 236 to 258 (23 residues), see Phobius details amino acids 263 to 287 (25 residues), see Phobius details amino acids 307 to 340 (34 residues), see Phobius details PF01594: AI-2E_transport" amino acids 12 to 336 (325 residues), 173.9 bits, see alignment E=2.6e-55

Best Hits

KEGG orthology group: None (inferred from 85% identity to maq:Maqu_2425)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PP45 at UniProt or InterPro

Protein Sequence (371 amino acids)

>HP15_593 protein belonging to uncharacterized protein family UPF0118 (Marinobacter adhaerens HP15)
MYAKLETRTFLALLVGVSLAFVFLMKPFFGPIFWAVAIALIFHPVQQLLERKLGDRPNVN
ALITLCICMFIVVIPVLVLVTSLVAEGVALYQQIQSGEIRPGEYIDRVNQSFPAIQAFLA
QFDISFAELRDRAVSIFVGGSQFLGRQALGVGQNTFQFFLGLALMVYLAFFLLRDGRALV
ELMIRALPLGDERERLLFAKFAEVTRATVKGNLLIAIIQGALGGLIFWILGISGALLWGV
VMAIVSLLPAVGAALVWVPAAIYLAAVGDVVEAVVLTAFGVVVIGLADNLLRPVLVGRDT
KLPDYIVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFSEEAHRPAASADEETH
AQSKKTGHDVP