Protein Info for Psest_0441 in Pseudomonas stutzeri RCH2

Annotation: Subtilisin-like serine proteases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 809 PF00082: Peptidase_S8" amino acids 256 to 581 (326 residues), 147.1 bits, see alignment E=3.5e-47

Best Hits

KEGG orthology group: None (inferred from 63% identity to ecw:EcE24377A_3322)

Predicted SEED Role

"putative serine protease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GEA0 at UniProt or InterPro

Protein Sequence (809 amino acids)

>Psest_0441 Subtilisin-like serine proteases (Pseudomonas stutzeri RCH2)
MATYKHLNIAREVLDNSRRTKNPPPFTKREDRRGHGQKLNAYFLTAEGQAKKQIGSTANS
PYVLKLKYDGTLNFSNLDVHGLEFVSQEDKQLCVVFATEEGLAKFADHLTKLGVMDDALT
YGQILEAIAGVETWSAEDRKSWAITHIGIPDTPTFKLDVELWPVYVASHPKRILLTNAFE
AWLSGERIKRLDKLNLDSLLMYRVEVTPEQAQLLLNHRDVRLVDLIPATGISIQQLNRDI
NELPRNIPAPAADAARVCILDSGINGNHPLLKPAMAESASFVDEEGDDDQAGHGTAVAGV
ALYGDVEACNNSNFWRPELWIFNGKVMKKCPHTGDAIYDELSLEASLTKAVEYFVELGCR
IFNLSLGNNNAPYDGAHVRGLAYILDVLSRRHNILFVVSTGNFRGSEEPPVPVNSWRDEY
PEYLVAEQSAIIDPAPAMMVLTVGSISRHNATFDSQKYPDISQLSPASENQPSPFTRHGP
SVKGALKPELVAAGGNLASPMRQANAQWSPHMRGLGVLTLNHQWAGNTIFKEVSGTSFAA
PYITHLAGRLLNEYPTASANMLRAMLVNQAYLPGEVISTFSNEFRKGYKEAKATRKRDVA
RDVAGYGVVSEADLFRSSNNVVVLMSEETIENDGCQFFELPLPDDYLRSARGTRELSITL
AYSPVVRTTRIDYLATQINYRLAVGTSLDEVQKHFSKELKAETEVLKEAKSSNRDISAQL
RNRGTVQSSRWTLRQCKPGEKWFLVVVRQDRDWNPSAAEKEPYSLVVTVADRDNEHAQLY
TQIQERIAQQAVAREQQKAQQAARLQSRG