Protein Info for HP15_4121 in Marinobacter adhaerens HP15

Annotation: cytoplasmic chaperone TorD family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 PF02613: Nitrate_red_del" amino acids 49 to 170 (122 residues), 107.3 bits, see alignment E=3.4e-35

Best Hits

KEGG orthology group: None (inferred from 56% identity to sit:TM1040_0399)

Predicted SEED Role

"Putative formate dehydrogenase-specific chaperone" in subsystem Formate hydrogenase

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PMH7 at UniProt or InterPro

Protein Sequence (203 amino acids)

>HP15_4121 cytoplasmic chaperone TorD family protein (Marinobacter adhaerens HP15)
MSNTAEIQCPRSISEEDRARAQIYQLLGVLLVDPPSSELLKGLASLQGDETPLGSACKNL
AALAERTNPYDAEREFNNLFVGLGRGELLPYASYYLTGFLNEKPLAELRTDLMTRGIKSR
SDVKEPEDHIGTLCEIMAGIITGEFPCDSGLPSQKAFFDAHLAKWAALFFTDLEEAQSAI
FYAPVGSLGRAFMAVEADAFAIQ