Protein Info for HP15_4073 in Marinobacter adhaerens HP15

Annotation: universal stress protein family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 146 PF00582: Usp" amino acids 1 to 146 (146 residues), 118.3 bits, see alignment E=2e-38

Best Hits

Swiss-Prot: 56% identical to TEAD_HALED: TRAP-T-associated universal stress protein TeaD (teaD) from Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)

KEGG orthology group: None (inferred from 80% identity to maq:Maqu_0351)

Predicted SEED Role

"Universal stress protein UspA and related nucleotide-binding proteins"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PLQ0 at UniProt or InterPro

Protein Sequence (146 amino acids)

>HP15_4073 universal stress protein family protein (Marinobacter adhaerens HP15)
MFKRILVAVDGSMTSFEALSKAIELQELTDAEIYLLCVYKHHSLFEASLSIGRPAEMDIP
DKVLSEYAKDVVNHAKQLAAERGGKNVRGFVKAGKPSRVIVEFAKEKGVDLIVIGTKGTH
SDKDGLFLGSVSHRVASHAKCPVLVV