Protein Info for PGA1_65p00090 in Phaeobacter inhibens DSM 17395

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 669 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF04230: PS_pyruv_trans" amino acids 106 to 331 (226 residues), 65.4 bits, see alignment E=4e-22

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7DX42 at UniProt or InterPro

Protein Sequence (669 amino acids)

>PGA1_65p00090 Uncharacterized conserved protein (Phaeobacter inhibens DSM 17395)
MRILFHAPVLSVHRPDPALSSILGVPPTVTDTLFGLKPAHKLTGNRGNIIHAEAPARSLR
KDPDGSAVGNIANLQKNLGEGYAETIAEHFDMIVVSLANFIRPNHDGIRLFTALEALDGR
VPFVVLGAGMQGSHAFTDLMPGNRDLLALLNERANLFGVRGTQTAEWLAQNGLENTTVLG
CPSLYVYPQSILAIDGTAAQAKGRQANVMTAGHFSMREGAIVERGTELAKAFDKIDASYV
FQDEIFAYGKFIKDRFGYNEGNNIAQPEELNRWLSRKCGHKVDFNRYYYFSEAGAWRQAA
MLHDVYIGDRFHGGVAALQAGQPAIFLKHDNRVAELTEHFGLPALNTQKFMRKGLKAVLD
EYLSPEMLDKMKATYRQRHAEYVAALAEHGLEVDTIVPDEPQPVPAVDRQGHLGAIHSPQ
DPDEGLPEGLWPTTTLTPSYAMRRLHPEGARELVVTFEGAGQALDRKDPLRPGFGERFLI
KSDYAVLSVLPHQQNWYRPLDLEQYFQAPDTRAWMAGFDKVHVLGSGMGAFGAMAFADLI
GAENVVALQPITTLAEDLIPGEIRFPAARKLDWSGAYRDACAGCDKAARIYAIHGDHPLD
LAHVARLRDALGARLISAELSHDSKRPVTPLLRAKRCLPRTALTCLRGGDAAALEQVLGA
LVQHKTPAE