Protein Info for Psest_3958 in Pseudomonas stutzeri RCH2

Annotation: Predicted Fe-S-cluster oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 145 PF03692: CxxCxxCC" amino acids 37 to 136 (100 residues), 51.4 bits, see alignment E=7.4e-18

Best Hits

KEGG orthology group: K06940, (no description) (inferred from 96% identity to psa:PST_0322)

Predicted SEED Role

"FIG00955680: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GRK9 at UniProt or InterPro

Protein Sequence (145 amino acids)

>Psest_3958 Predicted Fe-S-cluster oxidoreductase (Pseudomonas stutzeri RCH2)
MMRAPECPERLPVKTRLIASADPERLETWVRYSAGLCRDCHATCCTLPVEVRIDDLIRLE
LVDAFERDEPAKNIAKRLSKAGIVEHFNHKHEIFTLTRLTNGDCLYLDRKSRLCTVYAKR
PDTCRNHPRIGPRPGYCAYRSKTAG