Protein Info for HP15_3789 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein, membrane

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 469 transmembrane" amino acids 79 to 99 (21 residues), see Phobius details amino acids 105 to 130 (26 residues), see Phobius details amino acids 162 to 184 (23 residues), see Phobius details amino acids 249 to 273 (25 residues), see Phobius details PF11067: DUF2868" amino acids 127 to 445 (319 residues), 200.4 bits, see alignment E=2.6e-63

Best Hits

KEGG orthology group: None (inferred from 59% identity to maq:Maqu_0081)

Predicted SEED Role

"FIG00784724: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PI67 at UniProt or InterPro

Protein Sequence (469 amino acids)

>HP15_3789 conserved hypothetical protein, membrane (Marinobacter adhaerens HP15)
MTDNPLRLLLEFDSQAQRDRSQPPTFLHRRDRKFALVCEEQGEAPDAARWLAHLNRLSGP
RTTPTSADRTLASWRRINGGFAVSGAVAGTLAMAGLLFYDGGQRINITVFLAFVLLHLIF
ALFTTVQAMAGWQPWRWLAHRLGVNPGDGAFTRLQPVLMARAAHLGGIAFAIAGLFTLLA
MVVLQDLAFGWSTTLDTAATSYHGLVKAIAMPWAWLWPAAAPDLALVEATRFFRAGDPTA
SPDPALWGLWWPFVAMMWSTWVLLPRIILWACASVQARQKARRLLTSHPAMHALLYRMET
PALDTGNSHHDADDLPDTDTRGNLLPLPDSDILLCWAGAGEPELPESLRSGKQLVLSAGG
SASLSDDDQALHRIAEHLKNRARAVILLVRCWQPPTGELQDFLAAARDIWPDNARVALVP
LATDSNQQPDAHQIQPWLRFAERVGSEFVQVSLPPFQMRDPYTAIGDGS