Protein Info for Psest_3824 in Pseudomonas stutzeri RCH2

Annotation: Predicted membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 205 transmembrane" amino acids 41 to 60 (20 residues), see Phobius details amino acids 66 to 86 (21 residues), see Phobius details PF04536: TPM_phosphatase" amino acids 107 to 180 (74 residues), 31.1 bits, see alignment E=1.1e-11

Best Hits

KEGG orthology group: K08988, putative membrane protein (inferred from 94% identity to psa:PST_0448)

Predicted SEED Role

"FIG126011: Hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GSK9 at UniProt or InterPro

Protein Sequence (205 amino acids)

>Psest_3824 Predicted membrane protein (Pseudomonas stutzeri RCH2)
MTLLSESELQQVAAAIEQVERNTDAELVTVLAAQADDYRYIPLLWASLIALLLPGALLFF
SGWLGAWQLLLVQWATFIVLAVLFRMPGLTSRLIPRSVRCWRACNLARRQFIELNLHHTD
ADTGILIFVSEAERYVEILVDRGISSRIDNAAWESIVACFTERVKQGQVLEGFLGCIEAS
GALLAQHVPKTHERNELPNRLVVLP