Protein Info for Psest_3802 in Pseudomonas stutzeri RCH2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 25 to 42 (18 residues), see Phobius details amino acids 49 to 63 (15 residues), see Phobius details amino acids 78 to 98 (21 residues), see Phobius details amino acids 119 to 142 (24 residues), see Phobius details amino acids 164 to 188 (25 residues), see Phobius details amino acids 195 to 216 (22 residues), see Phobius details amino acids 247 to 267 (21 residues), see Phobius details amino acids 273 to 292 (20 residues), see Phobius details amino acids 312 to 330 (19 residues), see Phobius details amino acids 346 to 377 (32 residues), see Phobius details amino acids 384 to 406 (23 residues), see Phobius details amino acids 425 to 446 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 84% identity to psa:PST_0474)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GR54 at UniProt or InterPro

Protein Sequence (447 amino acids)

>Psest_3802 hypothetical protein (Pseudomonas stutzeri RCH2)
MLALLPLALVCELLALATHLSLLSVISGALLVLFFVWHWCSLMPYPRRLGLVTLGLLGYW
MLFGQPDWQQAQRMLSSAAYYAAFIGALGLAHCAVRRLPQLGELHRLLLRLPRASLYPSY
LFSTFAISSVLSFGMLNLVCGSLERYLERQPYNQQQRREGARGVMVTALRGFALVPLLAP
TSVAVAILTRELPGLSWSALLPFGLLCGAILLVVGWPMENRRLRQLQPTAESAQTTAPAD
TADGLRGLLCGSLVGVLLIALLANLTWLSATQAAMLLVPLAVTGMLLSQGGAPKAVYSEV
RDTLAGIRNETFIFACSALLGGLTAVLIPVERLASHFSSTPLALFGLGSAGMLAIIALAL
LGVAPIISLSLCAALLAQLAGHGVAIMQPAVALLVGFSLAMLLSPYGPSALMLARHAQLS
PWRIAFGWNGRFVLLVLGPLLLVPLLA