Protein Info for HP15_3521 in Marinobacter adhaerens HP15
Annotation: zinc uptake regulation protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 39% identical to ZUR_SHIFL: Zinc uptake regulation protein (zur) from Shigella flexneri
KEGG orthology group: K09823, Fur family transcriptional regulator, zinc uptake regulator (inferred from 74% identity to maq:Maqu_3775)Predicted SEED Role
"Zinc uptake regulation protein ZUR" in subsystem Oxidative stress or Transport of Zinc
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See E4PG21 at UniProt or InterPro
Protein Sequence (163 amino acids)
>HP15_3521 zinc uptake regulation protein (Marinobacter adhaerens HP15) MSARAIPYRPHNHDACVSQALTDARTICQRQNARLTPIRERVLELIWQSHKPLGAYDVLA ELSSDGHNAAPPTVYRALDFLQQHGLVHRIASLNAFIGCTHAGESHTGMFLICRACGNVL ELTAPEVSTEVRKAASGEGFRAETTTLEIAGLCPRCQSEPGHD