Protein Info for Psest_3479 in Pseudomonas stutzeri RCH2

Annotation: molybdenum cofactor synthesis domain

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 410 PF03453: MoeA_N" amino acids 13 to 172 (160 residues), 161.6 bits, see alignment E=1.9e-51 TIGR00177: molybdenum cofactor synthesis domain" amino acids 182 to 318 (137 residues), 98 bits, see alignment E=2.4e-32 PF00994: MoCF_biosynth" amino acids 186 to 321 (136 residues), 100.2 bits, see alignment E=1.3e-32 PF03454: MoeA_C" amino acids 336 to 405 (70 residues), 57.4 bits, see alignment E=2.1e-19

Best Hits

KEGG orthology group: K03750, molybdopterin biosynthesis protein MoeA (inferred from 98% identity to psa:PST_0903)

Predicted SEED Role

"Molybdopterin biosynthesis protein MoeA" in subsystem Molybdenum cofactor biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GML3 at UniProt or InterPro

Protein Sequence (410 amino acids)

>Psest_3479 molybdenum cofactor synthesis domain (Pseudomonas stutzeri RCH2)
MSACGCDTGGLKPVDEAIAELLARVPAPPSVEEVALRDALGRVLAEPLDASFPVPPWDNS
AMDGYALRAADLPAEGGALPLAGRIAAGDTASQQLPAGHAVRIFTGAPLPPGADTVVAQE
NCRVEGDRIWLPAVKAGDNVRCLGEETAAGERLIDAGKRLRPQELGLLATFGVARVKVYR
RLRVALLSSGNELREPGEPLDAGQIYNSNRYSLLGVLQSLGCEVHDYPILIDDLGASRDA
LADAASRFDLIITSGGVSVGEEDHLKQAIRELGELHLWRLAIQPGKPLAFGEVNGTPWIG
LPGNPAAALVTSLVVARPFLLRAQGCTQVQVTPLRLPADFAWRKANVRQQFLRARLEAVD
GRLEVRLFPRQGSAMLTSATWADGLAIVECGRTLAEGELVQYLPFSELLG