Protein Info for HP15_3312 in Marinobacter adhaerens HP15

Annotation: diguanylate cyclase/phosphodiesterase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1253 PF07793: DUF1631" amino acids 127 to 316 (190 residues), 144 bits, see alignment E=1.3e-45 PF26671: DUF1631_2nd" amino acids 424 to 562 (139 residues), 94.8 bits, see alignment E=1.6e-30 PF26672: DUF1631_3rd" amino acids 594 to 703 (110 residues), 76.4 bits, see alignment E=5.9e-25 PF26670: DUF1631_C" amino acids 743 to 807 (65 residues), 67.9 bits, see alignment 1.4e-22 TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 833 to 989 (157 residues), 80.7 bits, see alignment E=5e-27 PF00990: GGDEF" amino acids 838 to 986 (149 residues), 89.6 bits, see alignment E=5.7e-29 PF00563: EAL" amino acids 1032 to 1246 (215 residues), 165.9 bits, see alignment E=3.2e-52

Best Hits

KEGG orthology group: None (inferred from 78% identity to maq:Maqu_3555)

Predicted SEED Role

"FIG00783986: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PR19 at UniProt or InterPro

Protein Sequence (1253 amino acids)

>HP15_3312 diguanylate cyclase/phosphodiesterase (Marinobacter adhaerens HP15)
MDPRERRSSPRQPIKLAAQIDLGTGEAWPCQIADFCAEGLFVRYSGETSKKLDRAFASGI
PPELVIRFRGLDGARRHELHVSIVRRIDGAMGVNFSRPNPVAVDAMLQQCGGSRSQDRSS
LRAPSDRVQFVLHQSAKAVTQFIEPLMDACFVQMVEGLKLAAQRAVNDQQANEYMDASGQ
IQARQRVIWHQMARSLESPLKPAPKGFPGSELSVVDKGEFEDWLTIRVMVTKADTQYRGD
LLQLKLRLDKLGIANATGHHNPLGPSLVCEAFHNGLSQLKATREVEKVCLRVFEQTVLQQ
LGPLYKELNDILIRHGVLPDLDLSKYLSEQAGAKPETQQQPAEPEPVAAESAAAESKPKA
GAEDAGQPQSRRRAGMLGGEFRGYAQAAQTAFATVRNLLNTLSASRVARGDPEPLPFQPN
ARPLSSGEFQRELQQLQSQPVDTGEELAPLKERVVEKVKASGDNRLDEEQQETVDVVDRF
FKSVVESPKLSEYAQQRMRQLEVPVLKVVMRDPAFFDDQDSPVRGVMNRLAQLGVKGGRI
NPVVQRRVDELVERITTDFEQDTGVFEQTVQELDTLIDRQNLVYRRNVERVTAAAEGAQK
VAESKKAVADVLDNKLGGRKVPKAVISLLDGGWRDLLSLTWIRQGPDSQLWHDYLAVIDS
LLSFADDPNSSINLPELLRVIQDGLASISSNHMPSSQIRDELKQFLVRSPQKSPELVEVP
VAKPEQPDARKLSDREQRSLQRWINRAQKLRTGDWLRDQEKPDEPQYIRLVWVARGFSRF
VFVNHQGMRVVELELEALARQMRKGIIVPDSQYERPLVDESIDRMVRKVYDQLSWASTHD
ELTGLLGRREFERMLDQQLARREDERSLVRLDLRRFRLLNDTAGYQAGDETLKRVADILR
SHVGDGMPVARLAGNEFAMLVPSESASEAARDLIRAVEAAEFSFGGRDYRLSASAGVVPT
LPALVSAERWLRASEQALAASRQQGHGKVSEYALDADDQARQEQIAAKVASLSDLNEERM
LLRCQKIIPLHAKSSMAAQYEVLISMYDDEGNLITGRDFVRMAERYDRMQAVDRWVVGHM
LDWLREQAPDPRHFGGVCINLSGYSMNDQSLLEFIYEKLSEKDAPIERLWFEITEASAIN
DVQSVADFIIEMKELGCRFCLGNFGSGPSSFEFMRSLPVDLIKIDSAFTGQLSTSETDRA
MVRSMVDMAHYMNREVIASQVESRDVLDMLRQLGVDYAQGFVVEKPRLLDSLT