Protein Info for HP15_3269 in Marinobacter adhaerens HP15

Annotation: membrane protein containing ATP-binding region, ATPase-like domains

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 transmembrane" amino acids 63 to 82 (20 residues), see Phobius details amino acids 92 to 113 (22 residues), see Phobius details amino acids 125 to 144 (20 residues), see Phobius details amino acids 160 to 187 (28 residues), see Phobius details amino acids 199 to 219 (21 residues), see Phobius details PF00512: HisKA" amino acids 248 to 312 (65 residues), 33.9 bits, see alignment E=2.6e-12 PF02518: HATPase_c" amino acids 359 to 465 (107 residues), 83.8 bits, see alignment E=1.2e-27

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PQX6 at UniProt or InterPro

Protein Sequence (488 amino acids)

>HP15_3269 membrane protein containing ATP-binding region, ATPase-like domains (Marinobacter adhaerens HP15)
MLGFAKPVGRGGYNPETCPTLETAMTTEQIRQQQAAGFRNLRFAPDLEEAYRRTRSGLIR
QRARPVSVAGLFLFLIYAVMDALTLPPELAQVTVSIRLAVTCPVIASVVWLAYRASPSDR
LFERIYTLAYLVGGLSVVAIIAAARQVAFPLPYEGMILMLMFGYFAMGLPFFSASMVSLV
LIVGYLLTELWSGMSGSDIATNLFFLTTANLIGMVGAWTSEYRHRAHFLDRKLLDHMHQA
ARDESRRKTELITAASHDLRQPLNVIDITLESLSPSKDGPAAHPATQQLRDMIRHLRRLL
GTVFDSARLNEGMVQAVVRPTTLAPVFRDLNDLLADSLGNNKIEVRIDHPGSDLQVMADP
SLLSRILQNLIFNAVQHSSGTAVTLSAKAMGSHVLLEVADDGIGLPPGLVDNLFSPYVRG
AGPSEYPGLGLGLTIVQEFVALMRGECGAESRSGGGSVFWVRLPAAVTTTHEPAPDSRIL
SDCEHQAG