Protein Info for PGA1_c32990 in Phaeobacter inhibens DSM 17395

Annotation: putative methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 539 PF13489: Methyltransf_23" amino acids 41 to 157 (117 residues), 35.6 bits, see alignment E=2.7e-12 PF13847: Methyltransf_31" amino acids 42 to 154 (113 residues), 63.5 bits, see alignment E=7e-21 PF08242: Methyltransf_12" amino acids 49 to 148 (100 residues), 54.1 bits, see alignment E=7.6e-18 PF13649: Methyltransf_25" amino acids 49 to 147 (99 residues), 52.6 bits, see alignment E=2.2e-17 PF08241: Methyltransf_11" amino acids 49 to 151 (103 residues), 44.5 bits, see alignment E=7e-15 PF10119: MethyTransf_Reg" amino acids 220 to 302 (83 residues), 100.6 bits, see alignment E=2.4e-32

Best Hits

Predicted SEED Role

"FIG00918418: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7F122 at UniProt or InterPro

Protein Sequence (539 amino acids)

>PGA1_c32990 putative methyltransferase (Phaeobacter inhibens DSM 17395)
MNDWTSGYVAELNYTHDFFHEMTPSRLAFAALSRGHRHGLDDSGLTYCELGCGQGFTANL
LAAANPHVDVHAMDFNPAHIAGAQRLAQEAAVPNVTFYERSFEDFEEEANLPNSFDVIAL
HGVYSWVSRENQERISGFIARRLKPGGLVYISYNTQPGWAPSMPLRRLLTDRAAQSTGPL
EQRIDEALGFAEQLKQAGAGFFASNPGQLTRLSEMKSMPRNYLAHEFFNKDWTPFHFADV
AEDLAQAKLEFMGAANPLDHIDDICLSAPQRALLAEESNSIRREGLRDILLNEQFRADVF
VRGWLPQTQRGGVGGWFQTTFALARHYGTGPLKISWRRGDVALEASQYEPVLHALADGQH
NVRALLEQGVFSDMTWGDITRMLTILTGAGYIMPCLPQTGYADRIARCRDFNMAVCKNAE
DSERLRFLASPATGGGVAVDRMEQLFLLAQSEGHQTPHDWAAFVWRILEPQGQRLEQDGR
VLELAEENLAVLRARAHAFAARRLKILTGLGVSLVDESPSQIEMAHPAAAASSKRGAVA