Protein Info for PGA1_c32760 in Phaeobacter inhibens DSM 17395

Annotation: manganese transport system membrane protein MntC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 401 transmembrane" amino acids 12 to 37 (26 residues), see Phobius details amino acids 47 to 66 (20 residues), see Phobius details amino acids 72 to 93 (22 residues), see Phobius details amino acids 104 to 126 (23 residues), see Phobius details amino acids 146 to 167 (22 residues), see Phobius details amino acids 193 to 228 (36 residues), see Phobius details amino acids 235 to 256 (22 residues), see Phobius details amino acids 264 to 290 (27 residues), see Phobius details PF00950: ABC-3" amino acids 17 to 280 (264 residues), 187.7 bits, see alignment E=2.9e-59 PF01032: FecCD" amino acids 58 to 270 (213 residues), 32.3 bits, see alignment E=5.5e-12

Best Hits

KEGG orthology group: K11708, manganese/zinc/iron transport system permease protein (inferred from 84% identity to sil:SPO3364)

Predicted SEED Role

"Manganese ABC transporter, inner membrane permease protein SitC" in subsystem Transport of Manganese

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7E520 at UniProt or InterPro

Protein Sequence (401 amino acids)

>PGA1_c32760 manganese transport system membrane protein MntC (Phaeobacter inhibens DSM 17395)
MLWDALLLQMGYNATLVAIGATLLGISSGITGTFLFLRKRALVSDAISHATLPGVGLAFL
VMVALGGDGRNLAGLLAGSALSAMAGLWCLNWLTRRTRLAEDAAIGAVLSVFFGFGIVIL
TVIQTLGVGRQAGLEGFLLGSTAGMLWNDALVIAGGGAATLLLIMLLRRPMTLVAFDPEY
AAARGISVSRIDMMMMGLVMAVTVVGLKIVGLILIVALLIIPAVTARFWTERSDLVVLLA
GVAGGLSAYLGAAVSASAPNLPTGPIIVLMSFGLFALSLLLAPNRGVLAAVLRHLRFQRR
VHLRQGLLALAQDQVIYEPLTLRLLRRRGLLRADGVATEEGRARAAKALRDEHRWALVRS
DQTHEAAAALYDGLREIETVLTEDQISEIDRRIGGPREVPA