Protein Info for Psest_2905 in Pseudomonas stutzeri RCH2

Annotation: Protein involved in cell division

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 PF02661: Fic" amino acids 54 to 152 (99 residues), 61.7 bits, see alignment E=5e-21

Best Hits

Swiss-Prot: 40% identical to FIC_ECOLI: Probable protein adenylyltransferase Fic (fic) from Escherichia coli (strain K12)

KEGG orthology group: K04095, cell filamentation protein (inferred from 74% identity to pfv:Psefu_0916)

Predicted SEED Role

"Cell filamentation protein fic"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GQ13 at UniProt or InterPro

Protein Sequence (198 amino acids)

>Psest_2905 Protein involved in cell division (Pseudomonas stutzeri RCH2)
MLDKYGVGQDPLCYPGTTVLRNRLDLTDDQALHAAERTLSEIAAGSIDFALPPYDLTYLQ
RIHRTLFEDVYEWAGELRTVDISKGGTHFCNVTRIEPEAKKLFRQLEAANWYEGMSRQQL
VSAVAELYGDLNMVHPFREGNGRAQRILFDHIIVNAGYEISWWQVDEGEWIQANIDAVTC
DYQTMTNIFQRCIGQAIR