Protein Info for HP15_2726 in Marinobacter adhaerens HP15

Annotation: abortive infection protein-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 269 transmembrane" amino acids 7 to 28 (22 residues), see Phobius details amino acids 40 to 62 (23 residues), see Phobius details amino acids 83 to 105 (23 residues), see Phobius details amino acids 124 to 143 (20 residues), see Phobius details amino acids 155 to 178 (24 residues), see Phobius details amino acids 191 to 209 (19 residues), see Phobius details amino acids 216 to 233 (18 residues), see Phobius details amino acids 239 to 258 (20 residues), see Phobius details PF02517: Rce1-like" amino acids 123 to 228 (106 residues), 54.8 bits, see alignment E=4.9e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PKL4 at UniProt or InterPro

Protein Sequence (269 amino acids)

>HP15_2726 abortive infection protein-like protein (Marinobacter adhaerens HP15)
MLLKKQPLVAFPLVYLGWAYILWIPVLLSDSSVWAFPNLIWFLIGGASPVVAGLGLAAAN
GGKEQLEDLWRRLTDWRRIPGRWWLIIVLFWLAYDLAMAGLAMLLGVAGEPLDTNWQLFV
NPGPLLFLLVLSFVFPAVEEVGLRGFYLEALQQRFSPLVGGLVNGVVWALWHAPFVFFPG
YYANTTFHPELYWWMPMIICHTLLIVLVYNRTGRSILAVLIFHAMMNFTGEWLRISPEMY
PFMLFGNLALAALLVMFWKSGRQSLPNTC