Protein Info for PGA1_c28030 in Phaeobacter inhibens DSM 17395

Annotation: Panthothenate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 214 PF03308: MeaB" amino acids 18 to 63 (46 residues), 24.7 bits, see alignment 1.7e-09 PF00485: PRK" amino acids 29 to 166 (138 residues), 27 bits, see alignment E=5.9e-10 PF13238: AAA_18" amino acids 29 to 174 (146 residues), 30.1 bits, see alignment E=9e-11

Best Hits

KEGG orthology group: K00847, fructokinase [EC: 2.7.1.4] (inferred from 65% identity to sit:TM1040_0371)

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.4

Use Curated BLAST to search for 2.7.1.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7E3W7 at UniProt or InterPro

Protein Sequence (214 amino acids)

>PGA1_c28030 Panthothenate kinase (Phaeobacter inhibens DSM 17395)
MTREVTSLADLVAQVQALPVAEGRARRLVALAGAPGSGKSTLAELLVRALCAQGTSAAVV
PMDGFHLDNRLLSEMDLLARKGAPESFDQPGFLRLIAAMAVEEEVIYPEFDRARDIAIAG
AARVDAGVEVAVVEGNYLMFDAPGWRDLAALWDVSVRVDVPRDILRERLVARWQAYGLSD
AEAEERAEGNDLANADRVAAAALPADVIWKGETE