Protein Info for Psest_2810 in Pseudomonas stutzeri RCH2

Annotation: 5'/3'-nucleotidase SurE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 249 TIGR00087: 5'/3'-nucleotidase SurE" amino acids 1 to 232 (232 residues), 205.9 bits, see alignment E=3.4e-65 PF01975: SurE" amino acids 3 to 182 (180 residues), 188.3 bits, see alignment E=6.2e-60

Best Hits

Swiss-Prot: 94% identical to SURE_PSEU5: 5'-nucleotidase SurE (surE) from Pseudomonas stutzeri (strain A1501)

KEGG orthology group: K03787, 5'-nucleotidase [EC: 3.1.3.5] (inferred from 94% identity to psa:PST_1568)

Predicted SEED Role

"5-nucleotidase SurE (EC 3.1.3.5)" in subsystem Folate Biosynthesis (EC 3.1.3.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.3.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GPK9 at UniProt or InterPro

Protein Sequence (249 amino acids)

>Psest_2810 5'/3'-nucleotidase SurE (Pseudomonas stutzeri RCH2)
MRILIANDDGVYAPGLAALYDALADYAECKVVAPIQDMSGASSALTLDRPLHPVSMPNGF
IGLNGSPTDCVHLGLNGLLEEAPDMVVSGINLGANLGDDVLYSGTVAAAIEGRFTGRPAF
AFSLVSRSTENLPTAAHIARMLVEKHDQLELPPRTVLSVNVPNLPLDHIRGIRLTRLGHR
SRAKPPVKQANPRGKEGYWISVAGDVEDGGPGTDFHAVMQGYVSITPLQLDRTFHEAFGG
LESWLESVL