Protein Info for Psest_2744 in Pseudomonas stutzeri RCH2

Annotation: Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 PF08327: AHSA1" amino acids 12 to 142 (131 residues), 101.2 bits, see alignment E=2.5e-33

Best Hits

KEGG orthology group: None (inferred from 72% identity to vpe:Varpa_5255)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GPE3 at UniProt or InterPro

Protein Sequence (148 amino acids)

>Psest_2744 Uncharacterized conserved protein (Pseudomonas stutzeri RCH2)
MPSTIRLHRVLRATPERIYRAFLDPDAKAKWLPPNGFTGNVHEIEARVGGRYRMSFTNFS
TGTSHSFAGQFLELLENQRIRYEDTFDDPGLPGTIEVTVTLTQVSCGTELSIAQAGVPDA
IPAEACYLGWQESLTLLAKLVEVEIPDD