Protein Info for HP15_263 in Marinobacter adhaerens HP15

Annotation: thioesterase superfamily protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 153 PF01643: Acyl-ACP_TE" amino acids 15 to 141 (127 residues), 38.1 bits, see alignment E=2.4e-13 PF20791: Acyl-ACP_TE_C" amino acids 16 to 50 (35 residues), 23.2 bits, see alignment 1.3e-08 PF13279: 4HBT_2" amino acids 20 to 141 (122 residues), 76.4 bits, see alignment E=5.3e-25 PF03061: 4HBT" amino acids 29 to 92 (64 residues), 30.9 bits, see alignment E=5.8e-11

Best Hits

KEGG orthology group: K07107, acyl-CoA thioester hydrolase [EC: 3.1.2.-] (inferred from 78% identity to maq:Maqu_0509)

Predicted SEED Role

"FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.2.-

Use Curated BLAST to search for 3.1.2.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PKY5 at UniProt or InterPro

Protein Sequence (153 amino acids)

>HP15_263 thioesterase superfamily protein (Marinobacter adhaerens HP15)
MQQHDIDWDLPAPFTIEIAVRPEDTDRLGHANNVVYVRWLEDVSWAHIESLGMTWELHEK
TGKAMAITRTEIDYLASANAGDQLVLGTWLTDYDGRFRSARQFQLVRPSDGKTLVRAVST
HACVDLKTQRPARAPKEFAEILGSAVVAGGKGL