Protein Info for PGA1_c26620 in Phaeobacter inhibens DSM 17395

Annotation: putative molybdopterin biosynthesis protein MoeB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 378 transmembrane" amino acids 24 to 42 (19 residues), see Phobius details amino acids 56 to 74 (19 residues), see Phobius details amino acids 131 to 153 (23 residues), see Phobius details PF00899: ThiF" amino acids 109 to 344 (236 residues), 257.7 bits, see alignment E=4e-81

Best Hits

KEGG orthology group: None (inferred from 70% identity to sit:TM1040_0462)

Predicted SEED Role

"molybdopterin biosynthesis protein MoeB, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7F1Y8 at UniProt or InterPro

Protein Sequence (378 amino acids)

>PGA1_c26620 putative molybdopterin biosynthesis protein MoeB (Phaeobacter inhibens DSM 17395)
MLSIVVLAALIWWGGRFLGLGHTLRLGLLGVLYIAILAVHLTLPETAPLRGATGGSAAPW
LVLAGMVVLVLAYRHLLRRLRSRAQPEEDAEGGAKPRPDKFSESELDRYARHIVLRELGG
PGQKKLRKARVLVIGAGGLGAPALQYLAAAGVGTIGVIDDDLVENANLQRQVIHRDQDIG
IPKVFSAQAAMEAQNPYVTVRPYHRRLDADIATDLFGDYDLILDGTDNFETRYLVNRTAV
ALGKPLISGALSQWEGQISLFHPTAGGPCYQCIFPEAPAAGLAPSCSEAGVVGPLPGVVG
AMMALEAIKAVTGAGQTLQGEILIYDGLYSESRKITLSQRSDCPICAGGAGPVEETGKKE
TRKETGALHSDAGSSETI