Protein Info for PGA1_c26460 in Phaeobacter inhibens DSM 17395

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 510 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details PF02493: MORN" amino acids 50 to 70 (21 residues), 25.2 bits, see alignment (E = 5.3e-10) amino acids 73 to 95 (23 residues), 14.4 bits, see alignment (E = 1.5e-06) amino acids 96 to 118 (23 residues), 24.1 bits, see alignment (E = 1.2e-09) amino acids 119 to 141 (23 residues), 26.9 bits, see alignment (E = 1.5e-10) amino acids 142 to 160 (19 residues), 12 bits, see alignment (E = 8.8e-06) amino acids 165 to 185 (21 residues), 24.3 bits, see alignment (E = 1.1e-09) amino acids 188 to 209 (22 residues), 17.3 bits, see alignment (E = 1.7e-07) amino acids 211 to 232 (22 residues), 16.6 bits, see alignment (E = 2.9e-07) amino acids 234 to 256 (23 residues), 7.7 bits, see alignment (E = 0.0002) amino acids 257 to 277 (21 residues), 21.4 bits, see alignment (E = 8.5e-09) amino acids 280 to 302 (23 residues), 24.4 bits, see alignment (E = 1e-09) amino acids 303 to 325 (23 residues), 26.4 bits, see alignment (E = 2.3e-10) amino acids 326 to 347 (22 residues), 22.6 bits, see alignment (E = 3.6e-09) amino acids 349 to 369 (21 residues), 21.9 bits, see alignment (E = 6.3e-09) amino acids 372 to 394 (23 residues), 19.8 bits, see alignment (E = 2.8e-08) amino acids 395 to 415 (21 residues), 11.4 bits, see alignment (E = 1.3e-05) amino acids 418 to 440 (23 residues), 26.6 bits, see alignment (E = 2e-10) amino acids 441 to 462 (22 residues), 19.6 bits, see alignment (E = 3.2e-08)

Best Hits

KEGG orthology group: None (inferred from 70% identity to sit:TM1040_2279)

Predicted SEED Role

"MORN repeat protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7E3K0 at UniProt or InterPro

Protein Sequence (510 amino acids)

>PGA1_c26460 Uncharacterized protein conserved in bacteria (Phaeobacter inhibens DSM 17395)
MASRYSMTRFTTAALLTSALALGAAGGIRPALAQDDGKVLTTQDEIGGIYEGTFRGGLQH
GTGTYTLPNGYEYTGDWVDGEVRGRGVARFPNGSVYEGEFAKGKPEGAGKITFADGGTYE
GEWSDGVINGQGVAVYANGARYEGGFRDAKHHGKGVMRNPGGYEYDGDWVDGRKEGAGKI
TYPDGAIYEGEIRNGQLEGTGKLIMPDGLVYEGDWAANQMDGTGALTQPNGDIYEGPLAA
GRRQGEGKQIHANGDVYIGNFEDDLRHGEGTFTKTDGYVYSGEWLAGQIEGKGRVTYPDG
SVYEGQFRDDLADGVGKITYPDGSTYEGDWVAGVIEGTGTTTYPNGLVYTGEFKNAKNHG
QGVMTYPDGYRYEGGWKDGQRDGDAVVTYPDGSVYTGSFANSQRHGTGKIVMTDGFSYEG
DWTEGKISGKGVATYANGDVYEGSFLNSKRQGPGVMRYASGQEAEGTWENGALKTTGGAT
QGSDDADADQATEDQATDTAPAAADDDASN