Protein Info for HP15_2450 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1251 transmembrane" amino acids 26 to 47 (22 residues), see Phobius details amino acids 1194 to 1214 (21 residues), see Phobius details PF13116: DUF3971" amino acids 544 to 818 (275 residues), 98.6 bits, see alignment E=5.1e-32 PF13502: AsmA_2" amino acids 994 to 1239 (246 residues), 179.3 bits, see alignment E=9.5e-57

Best Hits

Predicted SEED Role

"FIG005080: Possible exported protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PHS6 at UniProt or InterPro

Protein Sequence (1251 amino acids)

>HP15_2450 conserved hypothetical protein (Marinobacter adhaerens HP15)
MSSADHEPPLPENLPESPPVRLLARLASLIWWMLLTLLVLLALYAGLGRQLTQNVDSFRD
DLARELSDRLGHDVSIGGLSSQWYWLDPAFTASDIQVTHPDTGIVVANLQHLNIRFAALA
SLMRLRIVFEDFQADGLELTVNQERGGDVAVRGAEIPEPVSNQLQEWLELAGDWLSDPYV
KITRVNLGIRDNQGNLRHLDIPQLDLDYRRGLFHASGRAMQSGTTQQLASFALVGQHFFR
GDFTGQLYLGVDSGRLFDGLVDEYQWRSLRVEGFDLGGEAWLTFRNGLLQQVTGTVRTPY
LQLGVGSQSLAPLEDIRARFGWRRHDTVMTDETVVESGAFALGEWHLKQLQWTWDGDVVS
PFSLRLAPSEGGMSVIADALPLAPTRRLAARLPLLPERALRALRDYRPGGFLDQLRIFFP
EGAPEDFQLSGRLRDVSVRAHGGAPGVTSVNGDIALDRQRGYVRIAAGESPVSLDFPQLF
GGAWSFPVLEGEVAWLLDGAITRVFSDGVRMRYGEATELDGAFDLRMDREGEDNLGLKVS
VKNGNADMLADFVPVKAVNPGLYDWLTTAILEADITSGTFFGHGQIGSGAPRGSFVTSMI
YEFDQASVRYDDAWPEVTGARGSVRVHNGDTLVRLEAGQTGGLDLDPGTVRVVPSDQGTR
IRVDTSARVPGESVGFWMENSPLGDMAGTEAQKLEYGGEYQLDLGIDLPLGAEQPPVVEA
KIAAQEGTVSYPSAGLAWRSVQGEMTYHSENGFSGGPLTAEFFDEPVTIAFSKSRAGNAL
TIRQSGTLPVPGVFEQAGLGTSSGFGLQGNVTYTADLDVGSDSTSGIRVRSTLEGLAVDW
PEPLSKTADEAAPLRATINPSAAGGLGITGDWENRATFDLLWKETGFDLRLGRLHLGPQV
LNDIDINALDLGDRWVVTTSSQRAEGRLTIPQNGDTVKADFQVLRLVRSETPPEDSPELL
TLEEQLEAFRALDMGNWPDIDVSIAELQLNDESLGQWAFRLRPEPFRLQVNDIEGRLNSL
TLLGDMSWSIVGDRETSRFTGSISGGALADLNELLDTEMPVTNEGTNIELDLDWPGRPDE
LSIPELSGSVSLRLDEGVILERNNTAQLFRVFNLLNSDTLWRRLKLDFSDLYERGVAFDA
ISGKAQIINGLLTMDPELQIVGPSGAFKLSGTTNMASEELDMRLVVVLPLTQNLPLAALL
MGAGAPIGGALFVLDKILGDPLSRLTSATYSVTGTWDEPEVNLQRVFDTGE