Protein Info for Psest_2551 in Pseudomonas stutzeri RCH2

Annotation: 1-aminocyclopropane-1-carboxylate deaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

Best Hits

KEGG orthology group: K01505, 1-aminocyclopropane-1-carboxylate deaminase [EC: 3.5.99.7] (inferred from 80% identity to psa:PST_1815)

Predicted SEED Role

"1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)" (EC 3.5.99.7)

MetaCyc Pathways

superpathway of branched chain amino acid biosynthesis (17/17 steps found)
superpathway of L-isoleucine biosynthesis I (13/13 steps found)
L-isoleucine biosynthesis I (from threonine) (7/7 steps found)
L-threonine degradation I (5/6 steps found)
superpathway of L-threonine metabolism (13/18 steps found)
L-methionine degradation II (2/3 steps found)
hypoglycin biosynthesis (4/14 steps found)

KEGG Metabolic Maps

Propanoate metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.99.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GK13 at UniProt or InterPro

Protein Sequence (313 amino acids)

>Psest_2551 1-aminocyclopropane-1-carboxylate deaminase (Pseudomonas stutzeri RCH2)
MSSSHPFDAPLILQPLSLDWLQRSGVEVAVLRLDLVDAELSGNKWFKLIKHLDAARRAGA
EGLISLGGAHSNHLHAVAAAGRRFGLATVGLLRGHEQQTPTVADLRAWGMELHWLGYGGY
RERHLPTFWEPWQARYPDFYPIPEGGGGLLGALGCAALVPALQAALGSVGWDDYDAIWLA
AGTGTTLAGLVIGEAGRHRVFGALAGPPSHSVSADVARLLEQAGVADGGYELLDASRGGF
GRFDQELARFILATERDGGVPLDPIYTAKTMMALRLYIERGYVPAGARLVFVHTGGLQGR
RAAESQLQKLIDG