Protein Info for HP15_2316 in Marinobacter adhaerens HP15

Annotation: flagellar basal body-associated protein FliL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 169 transmembrane" amino acids 20 to 42 (23 residues), see Phobius details PF03748: FliL" amino acids 69 to 169 (101 residues), 76.5 bits, see alignment E=1.1e-25

Best Hits

KEGG orthology group: K02415, flagellar FliL protein (inferred from 72% identity to maq:Maqu_1988)

Predicted SEED Role

"Flagellar biosynthesis protein FliL" in subsystem Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PGG9 at UniProt or InterPro

Protein Sequence (169 amino acids)

>HP15_2316 flagellar basal body-associated protein FliL (Marinobacter adhaerens HP15)
MAENNESEAAPAKKGKLKLIIMLVVVVILAIVLSVVGTLWFLGGGLPGMGEEEGDATEVP
EETFIPSSYYLIEKAIVTTVQAEGRQRYAQAYLALESTDPQALEAAKLHMPLIRSQLVTV
LGSSNFNELQTPEGRSGLAERMLTTVNQVLEQEGEPAIKRVLFRNFVVQ