Protein Info for HP15_2172 in Marinobacter adhaerens HP15

Annotation: nitrorecductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 246 PF00881: Nitroreductase" amino acids 22 to 223 (202 residues), 128.1 bits, see alignment E=4.1e-41

Best Hits

KEGG orthology group: None (inferred from 63% identity to gpb:HDN1F_02030)

Predicted SEED Role

"FIG002003: Protein YdjA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PF56 at UniProt or InterPro

Protein Sequence (246 amino acids)

>HP15_2172 nitrorecductase (Marinobacter adhaerens HP15)
MNAKAGSLPLPEIDIEEFRKVVRTRRSIRRFTDEPIPEAVLEDCLELATLAPNSSNLQPW
EFFVVRTPELKAKLAHACLGQNAAKTAAALIVVVARPDSWRAHARQALEDWPEEKLPPIV
EKYYRKVAPIHYNQGPLGILGLVKKAAGLAVGMTRPVPRGPYSNCEMKIWATKSTALAAQ
NLMLALRAHGYDSCPMEGFDEHRVKKLINLPGKGLVTMVLAAGRRAENGVYNRQYRFDQR
QMVHYL