Protein Info for PGA1_c22330 in Phaeobacter inhibens DSM 17395

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1522 transmembrane" amino acids 294 to 313 (20 residues), see Phobius details amino acids 749 to 770 (22 residues), see Phobius details amino acids 792 to 818 (27 residues), see Phobius details amino acids 826 to 852 (27 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7E2F6 at UniProt or InterPro

Protein Sequence (1522 amino acids)

>PGA1_c22330 hypothetical protein (Phaeobacter inhibens DSM 17395)
MALAYEIGAVRASASFDASGFHSGVQSTRSSLRSLRGSFDETSRDALRSMSAMERGWDTN
VSKTKASVKDHTLAVMGLVQANSRGSVSARAWAADLDRNARSFDNLRASLDPVYAQSKQY
EAVVEKVKTAVSSGVASQAYANRVMDLAATKYLGLTSAAERMAEAKKKEAAITAAAAQSY
HRLRSSIDPVYARKKQLEAAVETLTAAQKAGVISDRERVETLQLLRQNLAAVGPASSGAQ
KGVNKFGYIANQVGFQIQDVFVSGPMIGWFRAVAQQAPQAAGAFSMLGGSIGTIVPWLGT
ALAIGAALAPTLLNMGDASEKMSEQARLNASAVDAVVGALDDYSRYSEIARRSTVDLIEE
FGVFAEDVRRTYEYLSGVSVKRAMDALKTDNFDLFANLSDAASVITQMDDALSALERNKA
LGATSEQVQIFQENFEALEDEAYIAAQAIGLLPEQVMAIKSGFDELKNAQGLEDIRRQAQ
NALDVIQKIYPEGAKIPSAFTAAAIHLKGVIHSASAAVAETQKASGETFNWAAALSGVNA
EVSTIKRLLSAIGGGILSNAAKQTAIDALRAGQSIKSAAVEAERFRKELEFDARRENAQT
WLDKMVVDAEAAQYAHGLALDATLDKERTVARERDRNLKKVSSASAKSTNQLKKEAAAVR
SSLSPIARYNDELAELAKLKGLLSDDEMAKAVANMNVELADSLPLVGDLTDTLTEGLFNG
FKGTLDSMGDIFKRWLIQLISTAAKNRIMLSLGFGGSLAGTTASALGGLGGGGASGGGGG
NPAGSLVGLSGLGSSLVSGFGLGASTLFGGGLSAYTGLLGAQGAAALTGSLTSIAGFAGA
LGPIAIGIAVLAKGLSREYDGRAVRGSLGPDGFDGFEFDFWDGGFLRGDKQVNYDTRPEI
QKLLDDGADAVRTNVEKMAEAMGLGADAIKEFTAEGFTIWLTGQNAGSQEQIAKAFEEQL
TKLGDGMADLVLKTEDYAKEGEGAYETLTRLGGSLITANEGFGLLNQSLFEGSLKAAESA
SALMDAFGGVEQFTTGLGSYFELMFTDVERQAKRQEYAQKALDEAAGELNLTLPTTHAEF
RNLVGGLDRTTEEGRTAYVTLIGLADEFAVVHGNAQEAADALEGAGDSLSQLEAEAQKLK
EQNIRSALSDLNAAIKAATDDLQSQLGIVEDRLRLRFKRLQVSVGVEREAITSAHEQLIG
TLSGRLETLEAAAEASRALFETLDEAAQSRRRVDAEGAEWERRRALMYVQGGGSDPAKLS
KALGVLGEDNSASFSNYADYLSDYYRTSNIISGRAGEARSEMSADEAAVDALQQQIDLAT
LHHQEEMQRLDQILEDARQTLDMALGQYVAAIRVENAVAQLTHTADRHALVSERVEVRMA
ELETIRLSMEQLVEGALGAENGLPSINQGVQNVVGAVNALGGSIGQMTAGIAAATRVQAE
ANRIAQTKALERKHIVTEPRSASVGSARDDGTVSELRELRKEVVRLREGNEGYLGPISKA
TGATERTLKRAERDRQTTKGAA